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Coveragebed, Depth/Breadth Of Coverage
I'm using coverageBed to calculate the depth and breadth of coverage, but I'm not sure I'm doing this right. I want to calculate the two values for each human chromosome. For example, I've created a...
View ArticleIntersecting compressed gVCF with bed file
This may be a ridiculously simple question to ask but, I have a compressed genomic VCF file generated by the Strelka germline variant caller, with lines like the following, where no variation was...
View Articlehow can i find bedtools source code
Is there any way to find the bedTools source code. Thanks.
View ArticleSnps Comparison
Hello,I would like to compare SNPs from different methods:number of SNPsSNPs postion (position where method A has SNPs but not B and vice versa. Where both have SNPs)I would be interested to get a...
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