Hello,
I would like to compare SNPs from different methods:
- number of SNPs
- SNPs postion (position where method A has SNPs but not B and vice versa. Where both have SNPs)
I would be interested to get a output file which contain all above information and also would like to see the differences visualized i.e. where could load the two files which contain the SNPs and aligment.
In which format the SNPs has to be stored and which tools have to be used in order to make a comparison possibel?
Thank you in advance.